There’s something deeply comforting about a savory breakfast you can make once and enjoy all week. This breakfast tortilla bake is exactly that kind of recipe. It’s layered with tortillas, eggs, veggies, beans, and cheese, then baked until everything melds together into a sliceable, reheat-friendly meal. Think of it as a cross between a frittata and a spicy lasagna, with bold Southwestern flavors holding it all together.
What I love most about this bake is how flexible it is. It works just as well for breakfast as it does for lunch or dinner, and it’s mostly hands-off once it’s in the oven. Eggs are always a meal prep winner, and when you pair them with tortillas and a savory filling, you’ve got something that actually feels exciting to pull out of the fridge on a busy morning.
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What’s in a breakfast tortilla bake?
A breakfast tortilla bake is a layered, baked dish made with tortillas, eggs, and a hearty filling. Instead of wrapping everything into tacos or burritos, you stack the ingredients in a baking dish and let the oven do the work.
This version uses black beans, bell peppers, jalapeño, chorizo (or soyrizo), and cheese. The eggs are poured over the layers so they set as the bake cooks, holding everything together. Once it cools slightly, you can slice it into squares for easy meal prep.
Other veggies that would go well in this breakfast bake:
- tomato
- zucchini
- potato
- broccoli
- cauliflower
- red onion
- shredded cabbage
- greens
- mushrooms
- green onions
Those are my picks, but I don’t think you can go wrong with any veggie combo in this one!

Ingredients You’ll Need
- 6 eggs, whisked
- Cooking spray
- 1 tablespoon olive oil
- 1 large red bell pepper, chopped
- 1 jalapeño, seeded and chopped
- 6 oz chorizo or soyrizo (about 1 cup)
- Salt and pepper, to taste
- 1 (15 oz) can black beans, rinsed and drained
- 3 large tortillas, cut in half
- 1 cup shredded cheese
How to Make Breakfast Tortilla Bake
- Preheat your oven to 400°F. Grease a 9×9-inch baking dish with cooking spray.
- Heat olive oil in a skillet over medium heat. Add bell pepper, jalapeño, chorizo or soyrizo, black beans, and any extra veggies you’re using.
- If you’re not using soyrizo, season with salt, pepper, cumin, and chili powder. Cook for 5–10 minutes, until veggies soften.
- Add one layer of tortillas (two halves) to the baking dish. Top with half the veggie mixture and ¼ cup cheese.
- Add another tortilla layer, the remaining veggie mixture, and more cheese.
- Place the final tortilla layer on top and sprinkle with the remaining ½ cup cheese.
- Whisk eggs with a pinch of salt and pepper. Pour evenly over the dish. Tilt the pan to help the eggs spread.
- Cover and bake for 20 minutes. Uncover and bake for another 10 minutes.
- Let cool before slicing and transferring to meal prep containers.
Proteins you can use in a breakfast tortilla bake
This recipe already includes eggs, black beans, and chorizo, which makes it filling and satisfying. You can easily swap or adjust the protein based on your preferences.
- Use pinto beans or red beans instead of black beans.
- Try refried beans for a creamier layer.
- Use soyrizo for a plant-based option.
- Swap in 6–8 oz cooked ground beef, turkey, chicken, or plant-based crumbles.
- Skip the chorizo entirely if you prefer a milder bake.
The one thing we don’t recommend skipping is the egg. It’s what makes this dish hold together.
Ingredient Notes and Spice Tips
Chorizo and soyrizo bring a lot of flavor and heat, which is why this recipe doesn’t rely heavily on extra spices. If you’re not using a spicy sausage, add:
- 1 teaspoon cumin
- 1 teaspoon coriander
- ½ teaspoon chipotle powder or chili powder
For extra heat, add cayenne or serve with your favorite hot sauce. Any tortilla works here, including gluten-free options.

How to Store and Reheat
This breakfast tortilla bake is ideal for meal prep.
- Fridge: Store in an airtight container for up to 5 days.
- Freezer: Freeze for up to 6 months. Slice into individual portions first for easier reheating.
Reheat in the microwave, toaster oven, or a 350°F oven. If using the oven, tent loosely with foil. You can reheat straight from frozen; it just takes a bit longer.
If you’re new to planning meals ahead, our guide to Meal Planning for Beginners is a great place to start.
Serving Ideas
This bake is filling on its own, but you can easily turn it into a larger meal. Serve it with rice or quinoa, or pair it with a simple green salad and vinaigrette for lunch or dinner. It also works well as a no-fuss option for busy weeks when you want something warm and savory without extra prep.
FAQs
Yes. Use soyrizo or skip the sausage entirely and add extra beans or veggies. The eggs provide plenty of structure and protein.
Absolutely. Freeze it in individual slices for up to six months. This makes weekday mornings much faster.
Any tortillas work here. Flour, corn, or gluten-free tortillas all bake well in this recipe.
Yes. This recipe was designed for meal prep. It reheats well and stays satisfying for several days.
Definitely. It’s hearty enough for any meal, especially when paired with a salad or grain.
Meal prep doesn’t have to be complicated to be satisfying. This breakfast tortilla bake is proof that a flexible, savory recipe can carry you through busy mornings and beyond.
Happy prepping!
Other Tex Mex Breakfast Meal Preps!

Breakfast Tortilla Bake
Ingredients
- cooking spray
- 1 TBSP olive oil
- 1 large red bell pepper chopped
- 1 jalapeno seeded and chopped
- 6 oz chorizo or soyrizo (about 1 cup)
- salt and pepper to taste
- 15 oz can of black beans rinsed and drained
- 3 large tortillas cut in half
- 1 cup shredded cheese
- 6 eggs whisked
Instructions
- Preheat your oven to 400 F and grease a 9×9 baking dish with cooking spray.
- Add 1 TBSP oil to a skillet over medium heat, followed by the bell pepper, jalapeno, soyrizo/chorizo, beans, and any other veggies you want to use. Stir well and season if NOT using soyrizo with salt, pepper, cumin and chili powder. Cook for about 5-10 minutes, until the veggies have softened.
- Add 1 layer of tortillas (2 tortilla halves) to the bottom of the baking dish. Add 1/2 of the veggie mixture, followed by 1/4 cup shredded cheese. Add another layer of tortillas on top, followed by the remaining 1/2 of the mixture and more cheese. Place the last layer of tortillas on top and sprinkle the remaining 1/2 cup of cheese on top.
- Whisk eggs in a bowl and season with a pinch of salt and pepper. Pour the eggs over the tortilla layers. Tilt the pan a little to get the eggs to spread evenly in the dish.
- Cover the dish and bake for 20 minutes, then uncover and bake for another 10 minutes.
- Let the tortilla bake cool down before slicing it and adding it to meal prep containers.

Amanda L Howard says
This was super yummy! Although I did end up having to add the beans at the end since I didn’t see where to add them in the recipe.
Lisa M Wilson says
it states the black beans are in the veggie mix cooked earlier
Elisabeth Ferreira says
Love your meal plans. Can yo do more buffet plans those are very helpful with lots of variety?Do you have a vegan alternative for the tortilla breakfast bake so I don’t have to use the eggs?